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PHETA2 PH domain containing endocytic trafficking adaptor 2 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110483058, updated on 15-Mar-2024

Summary

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Gene symbol
PHETA2
Gene description
PH domain containing endocytic trafficking adaptor 2
Locus tag
RLOC_00007918
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Also known as
FAM109B
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
3
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 1A NC_042566.1 (16097236..16099980)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657507.1 (2596641..2603145, complement)

Chromosome 1A - NC_042566.1Genomic Context describing neighboring genes Neighboring gene WBP2 N-terminal like Neighboring gene alpha-N-acetylgalactosaminidase Neighboring gene single-pass membrane protein with aspartate rich tail 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit A6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sesquipedalian-2
Names
Sesquipedalian-2
family with sequence similarity 109 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042566.1 Reference lonStrDom2 Primary Assembly

    Range
    16097236..16099980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021552695.2 → XP_021408370.1  sesquipedalian-2

    UniProtKB/TrEMBL
    A0A218V110
    Conserved Domains (1) summary
    cd13288
    Location:11 → 138
    PH_Ses; Sesquipedalian family Pleckstrin homology (PH) domain
Nucleotide Protein
Heading Accession and Version

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