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RAI14 retinoic acid induced 14 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110482610, updated on 15-Mar-2024

Summary

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Gene symbol
RAI14
Gene description
retinoic acid induced 14
Locus tag
RLOC_00010828
See related
Ensembl:ENSLSDG00000010518
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Also known as
RAI14_0; Ankycorbin
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
18
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) Z NC_042595.1 (36133810..36223322)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018654896.1 (2645176..2664834, complement)

Chromosome Z - NC_042595.1Genomic Context describing neighboring genes Neighboring gene alpha-methylacyl-CoA racemase Neighboring gene C1q and TNF related 3 Neighboring gene RAD1 checkpoint DNA exonuclease Neighboring gene biogenesis of ribosomes BRX1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankycorbin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042595.1 Reference lonStrDom2 Primary Assembly

    Range
    36133810..36223322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031507437.1 → XP_031363297.1  ankycorbin isoform X1

    Conserved Domains (5) summary
    PHA03095
    Location:12 → 225
    PHA03095; ankyrin-like protein; Provisional
    COG1196
    Location:522 → 886
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:320 → 663
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    sd00045
    Location:86 → 116
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:90 → 182
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_031507438.1 → XP_031363298.1  ankycorbin isoform X2

    Conserved Domains (5) summary
    PHA03095
    Location:12 → 225
    PHA03095; ankyrin-like protein; Provisional
    COG1196
    Location:493 → 857
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:291 → 634
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    sd00045
    Location:86 → 116
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:90 → 182
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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