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STYXL1 serine/threonine/tyrosine interacting like 1 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110482065, updated on 15-Mar-2024

Summary

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Gene symbol
STYXL1
Gene description
serine/threonine/tyrosine interacting like 1
Locus tag
RLOC_00009050
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 19 NC_042584.1 (5180298..5191248)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657396.1 (1792562..1803512)

Chromosome 19 - NC_042584.1Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix 3 Neighboring gene malate dehydrogenase 2 Neighboring gene transmembrane protein 120A Neighboring gene NADPH--cytochrome P450 reductase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudophosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of stress granule assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine/tyrosine-interacting-like protein 1
Names
Serine/threonine/tyrosine-interacting-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042584.1 Reference lonStrDom2 Primary Assembly

    Range
    5180298..5191248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031506443.1 → XP_031362303.1  serine/threonine/tyrosine-interacting-like protein 1

    UniProtKB/TrEMBL
    A0A218V222
    Conserved Domains (1) summary
    cl28904
    Location:169 → 319
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
Heading Accession and Version

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