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TGM2 transglutaminase 2 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110479788, updated on 15-Mar-2024

Summary

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Gene symbol
TGM2
Gene description
transglutaminase 2
Locus tag
RLOC_00013562
See related
Ensembl:ENSLSDG00000010210
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Also known as
TGL2
Orthologs
human mouse all
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Genomic context

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See TGM2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
13
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 20 NC_042585.1 (1587336..1600503, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657216.1 (242255..255416, complement)

Chromosome 20 - NC_042585.1Genomic Context describing neighboring genes Neighboring gene TELO2 interacting protein 1 Neighboring gene regulation of nuclear pre-mRNA domain containing 1B Neighboring gene KIAA1755 ortholog Neighboring gene bactericidal permeability increasing protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-glutamine gamma-glutamyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptide cross-linking IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-glutamine gamma-glutamyltransferase 2
Names
Protein-glutamine gamma-glutamyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042585.1 Reference lonStrDom2 Primary Assembly

    Range
    1587336..1600503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021547294.2 → XP_021402969.1  protein-glutamine gamma-glutamyltransferase 2

    UniProtKB/TrEMBL
    A0A218U9Z9
    Related
    ENSLSDP00000014117.1
    Conserved Domains (3) summary
    smart00460
    Location:270 → 362
    TGc; Transglutaminase/protease-like homologues
    pfam00868
    Location:4 → 121
    Transglut_N; Transglutaminase family
    pfam00927
    Location:587 → 686
    Transglut_C; Transglutaminase family, C-terminal ig like domain
Nucleotide Protein
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