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NSUN2 NOP2/Sun RNA methyltransferase 2 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110479508, updated on 15-Mar-2024

Summary

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Gene symbol
NSUN2
Gene description
NOP2/Sun RNA methyltransferase 2
Locus tag
RLOC_00010521
See related
Ensembl:ENSLSDG00000015858
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 2 NC_042567.1 (81616603..81636567)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657197.1 (3358389..3383095, complement)

Chromosome 2 - NC_042567.1Genomic Context describing neighboring genes Neighboring gene terminal nucleotidyltransferase 4A Neighboring gene steroid 5 alpha-reductase 1 Neighboring gene ubiquitin conjugating enzyme E2 QL1 Neighboring gene mediator complex subunit 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA (cytidine-5-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA cytosine C(5)-methyltransferase NSUN2
Names
NOP2/Sun RNA methyltransferase family member 2
tRNA (cytosine(34)-C(5))-methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042567.1 Reference lonStrDom2 Primary Assembly

    Range
    81616603..81636567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021546854.2 → XP_021402529.1  RNA cytosine C(5)-methyltransferase NSUN2

    UniProtKB/TrEMBL
    A0A218V477
    Related
    ENSLSDP00000022438.1
    Conserved Domains (1) summary
    COG0144
    Location:41 → 425
    RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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