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CERS2 ceramide synthase 2 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110476809, updated on 15-Mar-2024

Summary

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Gene symbol
CERS2
Gene description
ceramide synthase 2
Locus tag
RLOC_00010641
See related
Ensembl:ENSLSDG00000011933
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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See CERS2 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
12
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 25 NC_042590.1 (290486..295396, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657054.1 (500812..505722)

Chromosome 25 - NC_042590.1Genomic Context describing neighboring genes Neighboring gene cortexin domain-containing 1-like Neighboring gene SET domain bifurcated histone lysine methyltransferase 1 Neighboring gene MINDY lysine 48 deubiquitinase 1 Neighboring gene prune exopolyphosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042590.1 Reference lonStrDom2 Primary Assembly

    Range
    290486..295396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021542071.1 → XP_021397746.1  ceramide synthase 2

    UniProtKB/TrEMBL
    A0A218UF10
    Related
    ENSLSDP00000016583.1, ENSLSDT00000018861.1
    Conserved Domains (2) summary
    smart00724
    Location:131 → 332
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71 → 128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  2. XM_021542070.2 → XP_021397745.1  ceramide synthase 2

    UniProtKB/TrEMBL
    A0A218UF10
    Related
    ENSLSDP00000016591.1
    Conserved Domains (2) summary
    smart00724
    Location:131 → 332
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71 → 128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Nucleotide Protein
Heading Accession and Version

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