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IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110474657, updated on 15-Mar-2024

Summary

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Gene symbol
IGF2BP3
Gene description
insulin like growth factor 2 mRNA binding protein 3
Locus tag
RLOC_00008731
See related
Ensembl:ENSLSDG00000001358
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 2 NC_042567.1 (32383811..32495531, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018656947.1 (6883940..6995660)

Chromosome 2 - NC_042567.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116183298 Neighboring gene glycoprotein nmb Neighboring gene mitochondrial assembly of ribosomal large subunit 1 Neighboring gene transformer 2 alpha homolog Neighboring gene coiled-coil domain containing 126

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
insulin-like growth factor 2 mRNA-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042567.1 Reference lonStrDom2 Primary Assembly

    Range
    32383811..32495531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021538252.1 → XP_021393927.1  insulin-like growth factor 2 mRNA-binding protein 3

    Related
    ENSLSDP00000002442.1, ENSLSDT00000002876.1
    Conserved Domains (5) summary
    cd12627
    Location:1 → 77
    RRM1_IGF2BP3; RNA recognition motif 1 (RRM1) found in vertebrate insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3)
    cd12630
    Location:81 → 156
    RRM2_IGF2BP3; RNA recognition motif 2 (RRM2) found in vertebrate insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3)
    cd22490
    Location:198 → 273
    KH-I_IGF2BP1_rpt1; first type I K homology (KH) RNA-binding domain found in insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) and similar proteins
    cd22498
    Location:406 → 483
    KH-I_IGF2BP3_rpt3; third type I K homology (KH) RNA-binding domain found in insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3) and similar proteins
    cl00098
    Location:276 → 370
    KH-I; K homology (KH) RNA-binding domain, type I

  2. XM_031503849.1 → XP_031359709.1  insulin-like growth factor 2 mRNA-binding protein 3

    Conserved Domains (5) summary
    cd12627
    Location:1 → 77
    RRM1_IGF2BP3; RNA recognition motif 1 (RRM1) found in vertebrate insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3)
    cd12630
    Location:81 → 156
    RRM2_IGF2BP3; RNA recognition motif 2 (RRM2) found in vertebrate insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3)
    cd22490
    Location:198 → 273
    KH-I_IGF2BP1_rpt1; first type I K homology (KH) RNA-binding domain found in insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) and similar proteins
    cd22498
    Location:406 → 483
    KH-I_IGF2BP3_rpt3; third type I K homology (KH) RNA-binding domain found in insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3) and similar proteins
    cl00098
    Location:276 → 370
    KH-I; K homology (KH) RNA-binding domain, type I
Nucleotide Protein
Heading Accession and Version

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