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FHL2 four and a half LIM domains 2 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110474604, updated on 15-Mar-2024

Summary

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Gene symbol
FHL2
Gene description
four and a half LIM domains 2
Locus tag
RLOC_00009446
See related
Ensembl:ENSLSDG00000015446
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 1 NC_042565.1 (28462432..28518164)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018654774.1 (346070..401802)

Chromosome 1 - NC_042565.1Genomic Context describing neighboring genes Neighboring gene ECRG4 augurin precursor Neighboring gene NCK adaptor protein 2 Neighboring gene chromosome 1 C2orf49 homolog Neighboring gene transforming growth factor beta receptor associated protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of calcineurin-NFAT signaling cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
four and a half LIM domains protein 2
Names
Four and a half LIM domains protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042565.1 Reference lonStrDom2 Primary Assembly

    Range
    28462432..28518164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021538138.1 → XP_021393813.1  four and a half LIM domains protein 2

    UniProtKB/TrEMBL
    A0A218UWR9
    Conserved Domains (3) summary
    cd09422
    Location:36 → 97
    LIM1_FHL2; The first LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09433
    Location:221 → 278
    LIM4_FHL2; The fourth LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cl02475
    Location:101 → 157
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  2. XM_021538120.1 → XP_021393795.1  four and a half LIM domains protein 2

    UniProtKB/TrEMBL
    A0A218UWR9
    Related
    ENSLSDP00000021868.1, ENSLSDT00000024651.1
    Conserved Domains (3) summary
    cd09422
    Location:36 → 97
    LIM1_FHL2; The first LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09433
    Location:221 → 278
    LIM4_FHL2; The fourth LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cl02475
    Location:101 → 157
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  3. XM_021538128.2 → XP_021393803.1  four and a half LIM domains protein 2

    UniProtKB/TrEMBL
    A0A218UWR9
    Conserved Domains (3) summary
    cd09422
    Location:36 → 97
    LIM1_FHL2; The first LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09433
    Location:221 → 278
    LIM4_FHL2; The fourth LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cl02475
    Location:101 → 157
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version

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