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LIN9 lin-9 DREAM MuvB core complex component [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110473964, updated on 11-Apr-2024

Summary

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Gene symbol
LIN9
Gene description
lin-9 DREAM MuvB core complex component
Locus tag
RLOC_00001010
See related
Ensembl:ENSLSDG00000010509
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 3 NC_042568.1 (18170854..18209301, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018656726.1 (28075..66522, complement)

Chromosome 3 - NC_042568.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA binding domain containing 3 Neighboring gene uncharacterized LOC110473963 Neighboring gene Mix paired-like homeobox Neighboring gene uncharacterized LOC110473967 Neighboring gene poly(ADP-ribose) polymerase 1 Neighboring gene stum, mechanosensory transduction mediator homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription repressor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein lin-9 homolog
Names
Protein lin-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042568.1 Reference lonStrDom2 Primary Assembly

    Range
    18170854..18209301 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021536991.1 → XP_021392666.1  protein lin-9 homolog

    UniProtKB/TrEMBL
    A0A218UIZ5
    Related
    ENSLSDP00000014550.1, ENSLSDT00000016554.1
    Conserved Domains (1) summary
    pfam06584
    Location:143 → 247
    DIRP
Nucleotide Protein
Heading Accession and Version

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