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RFX4 regulatory factor X4 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110473424, updated on 15-Mar-2024

Summary

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Gene symbol
RFX4
Gene description
regulatory factor X4
Locus tag
RLOC_00003986
See related
Ensembl:ENSLSDG00000014654
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
18
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 1A NC_042566.1 (62669965..62756066)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018654752.1 (368608..454709, complement)

Chromosome 1A - NC_042566.1Genomic Context describing neighboring genes Neighboring gene t-complex 11 like 2 Neighboring gene RNA polymerase III subunit B Neighboring gene RIC8 guanine nucleotide exchange factor B Neighboring gene uncharacterized LOC116183166

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor RFX4
Names
Transcription factor RFX4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042566.1 Reference lonStrDom2 Primary Assembly

    Range
    62669965..62756066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021535952.1 → XP_021391627.1  transcription factor RFX4 isoform X1

    UniProtKB/TrEMBL
    A0A218UX44
    Related
    ENSLSDP00000020693.1, ENSLSDT00000023373.1
    Conserved Domains (1) summary
    pfam02257
    Location:59 → 134
    RFX_DNA_binding; RFX DNA-binding domain

  2. XM_021535963.1 → XP_021391638.1  transcription factor RFX4 isoform X2

    Conserved Domains (1) summary
    pfam02257
    Location:59 → 134
    RFX_DNA_binding; RFX DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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