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ZMAT4 zinc finger matrin-type 4 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110473401, updated on 15-Mar-2024

Summary

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Gene symbol
ZMAT4
Gene description
zinc finger matrin-type 4
Locus tag
RLOC_00000785
See related
Ensembl:ENSLSDG00000006487
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
7
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 22 NC_042587.1 (358845..405390)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018656526.1 (750810..797358, complement)

Chromosome 22 - NC_042587.1Genomic Context describing neighboring genes Neighboring gene secreted frizzled related protein 1 Neighboring gene uncharacterized LOC116184419 Neighboring gene transcriptional and immune response regulator Neighboring gene indoleamine 2,3-dioxygenase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger matrin-type protein 4
Names
Zinc finger matrin-type protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042587.1 Reference lonStrDom2 Primary Assembly

    Range
    358845..405390
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021535894.2 → XP_021391569.1  zinc finger matrin-type protein 4

    UniProtKB/TrEMBL
    A0A218UJC6
    Related
    ENSLSDP00000008690.1
    Conserved Domains (3) summary
    smart00451
    Location:142 → 175
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:147 → 169
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:198 → 222
    zf-met; Zinc-finger of C2H2 type
Nucleotide Protein
Heading Accession and Version

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