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SGTB small glutamine rich tetratricopeptide repeat co-chaperone beta [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110472588, updated on 15-Mar-2024

Summary

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Gene symbol
SGTB
Gene description
small glutamine rich tetratricopeptide repeat co-chaperone beta
Locus tag
RLOC_00012648
See related
Ensembl:ENSLSDG00000017313
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
11
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) Z NC_042595.1 (45918090..45941593, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018656281.1 (3801329..3824941, complement)

Chromosome Z - NC_042595.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 23 Neighboring gene trafficking protein particle complex subunit 13 Neighboring gene shieldin complex subunit 3 Neighboring gene neurolysin Neighboring gene erbb2 interacting protein Neighboring gene splicing regulatory glutamic acid and lysine rich protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein targeting to endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small glutamine-rich tetratricopeptide repeat-containing protein beta
Names
Small glutamine-rich tetratricopeptide repeat-containing protein beta
small glutamine rich tetratricopeptide repeat containing beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042595.1 Reference lonStrDom2 Primary Assembly

    Range
    45918090..45941593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021534390.2 → XP_021390065.2  small glutamine-rich tetratricopeptide repeat-containing protein beta

    UniProtKB/TrEMBL
    A0A218V971
    Conserved Domains (3) summary
    PLN03088
    Location:85 → 237
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:85 → 113
    TPR; TPR repeat [structural motif]
    pfam16546
    Location:5 → 64
    SGTA_dimer; Homodimerization domain of SGTA

  2. XM_021534391.1 → XP_021390066.1  small glutamine-rich tetratricopeptide repeat-containing protein beta

    UniProtKB/TrEMBL
    A0A218V971
    Conserved Domains (3) summary
    PLN03088
    Location:85 → 237
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:85 → 113
    TPR; TPR repeat [structural motif]
    pfam16546
    Location:5 → 64
    SGTA_dimer; Homodimerization domain of SGTA
Nucleotide Protein
Heading Accession and Version

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