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SLC31A1 solute carrier family 31 member 1 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110472212, updated on 15-Mar-2024

Summary

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Gene symbol
SLC31A1
Gene description
solute carrier family 31 member 1
Locus tag
RLOC_00010918
See related
Ensembl:ENSLSDG00000014956
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 17 NC_042582.1 (5343575..5366535)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018656171.1 (1362557..1385517, complement)

Chromosome 17 - NC_042582.1Genomic Context describing neighboring genes Neighboring gene FK506-binding protein 15 Neighboring gene FKBP prolyl isomerase 15 Neighboring gene cell division cycle 26 Neighboring gene pre-mRNA splicing tri-snRNP complex factor PRPF4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in copper ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity copper uptake protein 1
Names
High affinity copper uptake protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042582.1 Reference lonStrDom2 Primary Assembly

    Range
    5343575..5366535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021533715.1 → XP_021389390.1  high affinity copper uptake protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A218ULM1
    Related
    ENSLSDP00000021141.1, ENSLSDT00000023854.1
    Conserved Domains (1) summary
    pfam04145
    Location:66 → 196
    Ctr; Ctr copper transporter family

  2. XM_021533717.1 → XP_021389392.1  high affinity copper uptake protein 1 isoform X3

    Conserved Domains (1) summary
    pfam04145
    Location:37 → 167
    Ctr; Ctr copper transporter family

  3. XM_021533716.2 → XP_021389391.1  high affinity copper uptake protein 1 isoform X3

    Related
    ENSLSDP00000021144.1
    Conserved Domains (1) summary
    pfam04145
    Location:37 → 167
    Ctr; Ctr copper transporter family

  4. XM_021533714.2 → XP_021389389.1  high affinity copper uptake protein 1 isoform X1

    Related
    ENSLSDP00000021146.1
    Conserved Domains (1) summary
    pfam04145
    Location:108 → 238
    Ctr; Ctr copper transporter family
Nucleotide Protein
Heading Accession and Version

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