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PPP3CA protein phosphatase 3 catalytic subunit alpha [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110471147, updated on 15-Mar-2024

Summary

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Gene symbol
PPP3CA
Gene description
protein phosphatase 3 catalytic subunit alpha
Locus tag
RLOC_00002692
See related
Ensembl:ENSLSDG00000008061
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 4 NC_042569.1 (22738908..22908646, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018655915.1 (154414..324682, complement)

Chromosome 4 - NC_042569.1Genomic Context describing neighboring genes Neighboring gene histone H2A.Z Neighboring gene endomucin Neighboring gene B cell scaffold protein with ankyrin repeats 1 Neighboring gene uncharacterized LOC110471149 Neighboring gene solute carrier family 39 member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin-dependent protein phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcineurin-NFAT signaling cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of calcineurin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042569.1 Reference lonStrDom2 Primary Assembly

    Range
    22738908..22908646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021531441.2 → XP_021387116.1  serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X2

    Related
    ENSLSDP00000010949.1
    Conserved Domains (1) summary
    cd07416
    Location:41 → 345
    MPP_PP2B; PP2B, metallophosphatase domain

  2. XM_021531440.2 → XP_021387115.1  serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1

    UniProtKB/TrEMBL
    A0A218UP41
    Related
    ENSLSDP00000010947.1
    Conserved Domains (1) summary
    cd07416
    Location:41 → 345
    MPP_PP2B; PP2B, metallophosphatase domain
Nucleotide Protein
Heading Accession and Version

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