U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ZBTB16 zinc finger and BTB domain containing 16 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110470422, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ZBTB16
Gene description
zinc finger and BTB domain containing 16
Locus tag
RLOC_00001841
See related
Ensembl:ENSLSDG00000007178
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 24
Exon count:
7
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 24 NC_042589.1 (316206..367922, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018655692.1 (1370835..1423826)

Chromosome 24 - NC_042589.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 28 Neighboring gene 5-hydroxytryptamine receptor 3A Neighboring gene uncharacterized LOC116184451 Neighboring gene RNA binding motif protein 7 Neighboring gene RNA exonuclease 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger and BTB domain-containing protein 16
Names
Zinc finger and BTB domain-containing protein 16

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042589.1 Reference lonStrDom2 Primary Assembly

    Range
    316206..367922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021530041.2 → XP_021385716.1  zinc finger and BTB domain-containing protein 16

    UniProtKB/TrEMBL
    A0A218UPJ1
    Related
    ENSLSDP00000009694.1
    Conserved Domains (4) summary
    COG5048
    Location:463 → 622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520 → 540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:25 → 106
    BTB; BTB/POZ domain
    pfam15727
    Location:185 → 331
    DUF4678; Domain of unknown function (DUF4678)

  2. XM_021530042.2 → XP_021385717.1  zinc finger and BTB domain-containing protein 16

    UniProtKB/TrEMBL
    A0A218UPJ1
    Conserved Domains (4) summary
    COG5048
    Location:463 → 622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520 → 540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:25 → 106
    BTB; BTB/POZ domain
    pfam15727
    Location:185 → 331
    DUF4678; Domain of unknown function (DUF4678)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.