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CRBN cereblon [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110469852, updated on 15-Mar-2024

Summary

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Gene symbol
CRBN
Gene description
cereblon
Locus tag
RLOC_00001130
See related
Ensembl:ENSLSDG00000017054
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 12 NC_042578.1 (19206392..19225607, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018655560.1 (927316..943802)

Chromosome 12 - NC_042578.1Genomic Context describing neighboring genes Neighboring gene interleukin 5 receptor subunit alpha Neighboring gene tRNA nucleotidyl transferase 1 Neighboring gene uncharacterized LOC110469851 Neighboring gene leucine rich repeat neuronal 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4A-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein cereblon
Names
Protein cereblon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042578.1 Reference lonStrDom2 Primary Assembly

    Range
    19206392..19225607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021529007.2 → XP_021384682.1  protein cereblon isoform X1

    UniProtKB/TrEMBL
    A0A218URA4
    Related
    ENSLSDP00000024305.1
    Conserved Domains (2) summary
    cd15777
    Location:324 → 425
    CRBN_C_like; Thalidomide-binding C-terminal domain of cereblon (CRBN) and similar protein domains
    pfam02190
    Location:83 → 320
    LON_substr_bdg; ATP-dependent protease La (LON) substrate-binding domain

  2. XM_021529008.2 → XP_021384683.1  protein cereblon isoform X2

    Conserved Domains (2) summary
    cd15777
    Location:323 → 424
    CRBN_C_like; Thalidomide-binding C-terminal domain of cereblon (CRBN) and similar protein domains
    pfam02190
    Location:82 → 319
    LON_substr_bdg; ATP-dependent protease La (LON) substrate-binding domain
Nucleotide Protein
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