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TMED5 transmembrane p24 trafficking protein 5 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110468299, updated on 15-Mar-2024

Summary

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Gene symbol
TMED5
Gene description
transmembrane p24 trafficking protein 5
Locus tag
RLOC_00002188
See related
Ensembl:ENSLSDG00000011033
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 8 NC_042574.1 (14272600..14281636)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018654728.1 (2216955..2225991)

Chromosome 8 - NC_042574.1Genomic Context describing neighboring genes Neighboring gene retinol dehydrogenase 8 Neighboring gene coiled-coil domain containing 18 Neighboring gene metal response element binding transcription factor 2 Neighboring gene divergent protein kinase domain 1A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 5
Names
Transmembrane emp24 domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042574.1 Reference lonStrDom2 Primary Assembly

    Range
    14272600..14281636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021526088.1 → XP_021381763.1  transmembrane emp24 domain-containing protein 5

    Related
    ENSLSDP00000015307.1, ENSLSDT00000017392.1
    Conserved Domains (1) summary
    pfam01105
    Location:33 → 220
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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