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COL10A1 collagen type X alpha 1 chain [ Numida meleagris (helmeted guineafowl) ]

Gene ID: 110396942, updated on 15-Mar-2024

Summary

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Gene symbol
COL10A1
Gene description
collagen type X alpha 1 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Numida meleagris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Numididae; Numida
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
100 current NumMel1.0 (GCF_002078875.1) 3 NC_034411.1 (63770921..63812921)

Chromosome 3 - NC_034411.1Genomic Context describing neighboring genes Neighboring gene protein FAM26F-like Neighboring gene dermatan sulfate epimerase Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene fyn related Src family tyrosine kinase Neighboring gene uncharacterized LOC110397071

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034411.1 Chromosome 3 Reference NumMel1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-1(X) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Numida meleagris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NumMel1.0 Primary Assembly

Genomic

  1. NC_034411.1 Reference NumMel1.0 Primary Assembly

    Range
    63770921..63812921
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021392839.1 → XP_021248514.1  collagen alpha-1(X) chain

    Conserved Domains (2) summary
    smart00110
    Location:541 → 670
    C1Q; Complement component C1q domain
    pfam01391
    Location:340 → 399
    Collagen; Collagen triple helix repeat (20 copies)

  2. XM_021392838.1 → XP_021248513.1  collagen alpha-1(X) chain

    Conserved Domains (2) summary
    smart00110
    Location:541 → 670
    C1Q; Complement component C1q domain
    pfam01391
    Location:340 → 399
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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