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CTNND2 catenin delta 2 [ Numida meleagris (helmeted guineafowl) ]

Gene ID: 110393375, updated on 15-Mar-2024

Summary

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Gene symbol
CTNND2
Gene description
catenin delta 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Numida meleagris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Numididae; Numida
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
33
Annotation release Status Assembly Chr Location
100 current NumMel1.0 (GCF_002078875.1) 2 NC_034410.1 (75624248..76253325)

Chromosome 2 - NC_034410.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110394746 Neighboring gene uncharacterized LOC110395026 Neighboring gene uncharacterized LOC110393376 Neighboring gene uncharacterized LOC110393377 Neighboring gene uncharacterized LOC110394141 Neighboring gene death associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034410.1 Chromosome 2 Reference NumMel1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dendritic spine morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catenin delta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Numida meleagris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NumMel1.0 Primary Assembly

Genomic

  1. NC_034410.1 Reference NumMel1.0 Primary Assembly

    Range
    75624248..76253325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021386174.1 → XP_021241849.1  catenin delta-2 isoform X2

    Conserved Domains (4) summary
    smart00185
    Location:421 → 461
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:674 → 715
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:392 → 417
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:390 → 563
    PLN03200; cellulose synthase-interactive protein; Provisional

  2. XM_021386172.1 → XP_021241847.1  catenin delta-2 isoform X1

    Conserved Domains (4) summary
    smart00185
    Location:435 → 475
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:688 → 729
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:406 → 431
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:404 → 577
    PLN03200; cellulose synthase-interactive protein; Provisional

  3. XM_021386181.1 → XP_021241856.1  catenin delta-2 isoform X8

    Conserved Domains (4) summary
    smart00185
    Location:435 → 475
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:688 → 729
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:406 → 431
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:404 → 577
    PLN03200; cellulose synthase-interactive protein; Provisional

  4. XM_021386175.1 → XP_021241850.1  catenin delta-2 isoform X3

    Conserved Domains (4) summary
    smart00185
    Location:435 → 475
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:688 → 729
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:406 → 431
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:404 → 577
    PLN03200; cellulose synthase-interactive protein; Provisional

  5. XM_021386178.1 → XP_021241853.1  catenin delta-2 isoform X5

    Conserved Domains (4) summary
    smart00185
    Location:435 → 475
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:688 → 729
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:406 → 431
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:404 → 577
    PLN03200; cellulose synthase-interactive protein; Provisional

  6. XM_021386182.1 → XP_021241857.1  catenin delta-2 isoform X9

    Conserved Domains (4) summary
    smart00185
    Location:435 → 475
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:688 → 729
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:406 → 431
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:404 → 577
    PLN03200; cellulose synthase-interactive protein; Provisional

  7. XM_021386179.1 → XP_021241854.1  catenin delta-2 isoform X6

    Conserved Domains (4) summary
    smart00185
    Location:435 → 475
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:688 → 729
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:406 → 431
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:404 → 577
    PLN03200; cellulose synthase-interactive protein; Provisional

  8. XM_021386173.1 → XP_021241848.1  catenin delta-2 isoform X2

    Conserved Domains (4) summary
    smart00185
    Location:421 → 461
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:674 → 715
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:392 → 417
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:390 → 563
    PLN03200; cellulose synthase-interactive protein; Provisional

  9. XM_021386180.1 → XP_021241855.1  catenin delta-2 isoform X7

    Conserved Domains (4) summary
    smart00185
    Location:345 → 385
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:598 → 639
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:316 → 341
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:314 → 487
    PLN03200; cellulose synthase-interactive protein; Provisional

  10. XM_021386176.1 → XP_021241851.1  catenin delta-2 isoform X4

    Conserved Domains (4) summary
    smart00185
    Location:406 → 446
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:659 → 700
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:377 → 402
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:375 → 548
    PLN03200; cellulose synthase-interactive protein; Provisional

  11. XM_021386185.1 → XP_021241860.1  catenin delta-2 isoform X11

    Conserved Domains (4) summary
    smart00185
    Location:147 → 187
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:400 → 441
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:118 → 143
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:116 → 289
    PLN03200; cellulose synthase-interactive protein; Provisional

  12. XM_021386186.1 → XP_021241861.1  catenin delta-2 isoform X12

    Conserved Domains (4) summary
    smart00185
    Location:295 → 335
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:548 → 589
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:266 → 291
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:264 → 437
    PLN03200; cellulose synthase-interactive protein; Provisional

  13. XM_021386184.1 → XP_021241859.1  catenin delta-2 isoform X10

    Conserved Domains (4) summary
    smart00185
    Location:205 → 245
    ARM; Armadillo/beta-catenin-like repeats
    pfam00514
    Location:458 → 499
    Arm; Armadillo/beta-catenin-like repeat
    sd00043
    Location:176 → 201
    ARM; armadillo repeat [structural motif]
    cl27106
    Location:174 → 347
    PLN03200; cellulose synthase-interactive protein; Provisional

RNA

  1. XR_002434978.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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