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NLRX1 NLR family member X1 [ Numida meleagris (helmeted guineafowl) ]

Gene ID: 110387779, updated on 15-Mar-2024

Summary

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Gene symbol
NLRX1
Gene description
NLR family member X1
Gene type
protein coding
RefSeq status
MODEL
Organism
Numida meleagris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Numididae; Numida
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
10
Annotation release Status Assembly Chr Location
100 current NumMel1.0 (GCF_002078875.1) 23 NC_034431.1 (4446876..4452804, complement)

Chromosome 23 - NC_034431.1Genomic Context describing neighboring genes Neighboring gene Cbl proto-oncogene Neighboring gene dynein regulatory complex subunit 12 homolog Neighboring gene NHERF family PDZ scaffold protein 4 Neighboring gene ATP binding cassette subfamily G member 4 Neighboring gene histone H4 transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034431.1 Chromosome 23 Reference NumMel1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NLR family member X1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Numida meleagris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NumMel1.0 Primary Assembly

Genomic

  1. NC_034431.1 Reference NumMel1.0 Primary Assembly

    Range
    4446876..4452804 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021376339.1 → XP_021232014.1  NLR family member X1 isoform X4

    Conserved Domains (3) summary
    sd00033
    Location:828 → 856
    LRR_RI; leucine-rich repeat [structural motif]
    cl21455
    Location:294 → 451
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl26161
    Location:827 → 1017
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  2. XM_021376337.1 → XP_021232012.1  NLR family member X1 isoform X2

    Conserved Domains (3) summary
    sd00033
    Location:883 → 911
    LRR_RI; leucine-rich repeat [structural motif]
    cl21455
    Location:349 → 506
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl26161
    Location:882 → 1072
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  3. XM_021376336.1 → XP_021232011.1  NLR family member X1 isoform X1

    Conserved Domains (3) summary
    sd00033
    Location:887 → 915
    LRR_RI; leucine-rich repeat [structural motif]
    cl21455
    Location:353 → 510
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl26161
    Location:886 → 1076
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  4. XM_021376340.1 → XP_021232015.1  NLR family member X1 isoform X5

    Conserved Domains (3) summary
    sd00033
    Location:803 → 831
    LRR_RI; leucine-rich repeat [structural motif]
    cl21455
    Location:269 → 426
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl26161
    Location:802 → 992
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  5. XM_021376338.1 → XP_021232013.1  NLR family member X1 isoform X3

    Conserved Domains (3) summary
    sd00033
    Location:862 → 890
    LRR_RI; leucine-rich repeat [structural motif]
    cl21455
    Location:328 → 485
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl26161
    Location:861 → 1051
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
Nucleotide Protein
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