These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001193487.1 → NP_001180416.1 TFIIA-alpha and beta-like factor isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
- Source sequence(s)
-
AK302220, BG207854
- Consensus CDS
-
CCDS54359.1
- UniProtKB/Swiss-Prot
-
Q9UNN4
- Related
- ENSP00000387896, ENST00000430487
- Conserved Domains (2) summary
-
- cd07976
Location:387 – 444
Blast Score: 269
- TFIIA_alpha_beta_like; Precursor of TFIIA alpha and beta subunits and similar proteins
- pfam03153
Location:8 – 444
Blast Score: 600
- TFIIA; Transcription factor IIA, alpha/beta subunit
-
NM_006872.3 → NP_006863.2 TFIIA-alpha and beta-like factor isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AK302220, BC025991, BG207854
- Consensus CDS
-
CCDS46281.1
- UniProtKB/Swiss-Prot
-
Q9UNN4
- Related
- ENSP00000384597, OTTHUMP00000201062, ENST00000403751, OTTHUMT00000323852
- Conserved Domains (2) summary
-
- cd07976
Location:421 – 478
Blast Score: 267
- TFIIA_alpha_beta_like; Precursor of TFIIA alpha and beta subunits and similar proteins
- pfam03153
Location:9 – 478
Blast Score: 753
- TFIIA; Transcription factor IIA, alpha/beta subunit
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000002.11 Reference GRCh37.p5 Primary Assembly
- Range
- 48844937..48906748
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000134.1 Alternate HuRef
- Range
- 48578316..48640115
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the cited
reason(s). Suppressed RefSeqs do not appear in BLAST databases, related sequence links,
or BLAST links (BLink), but may still be retrieved by clicking on their
accession.version below.
-
NM_172196.1: Suppressed sequence
- Description
- NM_172196.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.