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Clptm1 CLPTM1 regulator of GABA type A receptor forward trafficking [ Mus pahari (shrew mouse) ]

Gene ID: 110336175, updated on 15-Mar-2024

Summary

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Gene symbol
Clptm1
Gene description
CLPTM1 regulator of GABA type A receptor forward trafficking
See related
Ensembl:MGP_PahariEiJ_G0021161
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
14
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 19 NC_034608.1 (15167089..15199320, complement)

Chromosome 19 - NC_034608.1Genomic Context describing neighboring genes Neighboring gene CLK4 associating serine/arginine rich protein Neighboring gene RELB proto-oncogene, NF-kB subunit Neighboring gene apolipoprotein C2 Neighboring gene apolipoprotein C4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034608.1 Chromosome 19 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cleft lip and palate transmembrane protein 1
Names
CLPTM1, transmembrane protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034608.1 Reference PAHARI_EIJ_v1.1

    Range
    15167089..15199320 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021218617.2 → XP_021074276.1  cleft lip and palate transmembrane protein 1

    Related
    MGP_PahariEiJ_P0046155, MGP_PahariEiJ_T0046155.1
    Conserved Domains (1) summary
    pfam05602
    Location:57 → 497
    CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)
Nucleotide Protein
Heading Accession and Version

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