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Cdc5l cell division cycle 5 like [ Mus pahari (shrew mouse) ]

Gene ID: 110335435, updated on 15-Mar-2024

Summary

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Gene symbol
Cdc5l
Gene description
cell division cycle 5 like
See related
Ensembl:MGP_PahariEiJ_G0020633
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
16
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 18 NC_034607.1 (12973877..13011991, complement)

Chromosome 18 - NC_034607.1Genomic Context describing neighboring genes Neighboring gene SPT3 homolog, SAGA and STAGA complex component Neighboring gene U2 spliceosomal RNA Neighboring gene splicing factor YJU2 pseudogene Neighboring gene Friend virus susceptibility protein 1-like Neighboring gene spermatogenesis associated serine rich 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034607.1 Chromosome 18 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division cycle 5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034607.1 Reference PAHARI_EIJ_v1.1

    Range
    12973877..13011991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021217584.1 → XP_021073243.1  cell division cycle 5-like protein

    Related
    MGP_PahariEiJ_P0044395, MGP_PahariEiJ_T0044395.1
    Conserved Domains (3) summary
    COG5147
    Location:6 → 303
    REB1; Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning]
    pfam11831
    Location:404 → 655
    Myb_Cef; pre-mRNA splicing factor component
    cl25732
    Location:627 → 801
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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