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Jcad junctional cadherin 5 associated [ Mus pahari (shrew mouse) ]

Gene ID: 110333241, updated on 15-Mar-2024

Summary

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Gene symbol
Jcad
Gene description
junctional cadherin 5 associated
See related
Ensembl:MGP_PahariEiJ_G0018708
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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See Jcad in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 15 NC_034604.1 (1206403..1295630)

Chromosome 15 - NC_034604.1Genomic Context describing neighboring genes Neighboring gene protein arginine N-methyltransferase 1-like Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized protein C3orf38 homolog pseudogene Neighboring gene supervillin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034604.1 Chromosome 15 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
junctional protein associated with coronary artery disease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034604.1 Reference PAHARI_EIJ_v1.1

    Range
    1206403..1295630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029547135.1 → XP_029402995.1  junctional protein associated with coronary artery disease

    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1321
    JCAD; Junctional protein associated with coronary artery disease

  2. XM_021214785.2 → XP_021070444.1  junctional protein associated with coronary artery disease

    Related
    MGP_PahariEiJ_P0038548, MGP_PahariEiJ_T0038548.1
    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1321
    JCAD; Junctional protein associated with coronary artery disease
Nucleotide Protein
Heading Accession and Version

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