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Pkd2l2 polycystin 2 like 2, transient receptor potential cation channel [ Mus pahari (shrew mouse) ]

Gene ID: 110332912, updated on 15-Mar-2024

Summary

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Gene symbol
Pkd2l2
Gene description
polycystin 2 like 2, transient receptor potential cation channel
See related
Ensembl:MGP_PahariEiJ_G0018822
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
16
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 15 NC_034604.1 (29545405..29579035)

Chromosome 15 - NC_034604.1Genomic Context describing neighboring genes Neighboring gene receptor accessory protein 5 Neighboring gene cyclin-dependent kinase 2-associated protein 1-like Neighboring gene protein SET-like Neighboring gene family with sequence similarity 13 member B Neighboring gene Wnt family member 8A Neighboring gene NME/NM23 family member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034604.1 Chromosome 15 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycystic kidney disease 2-like 2 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034604.1 Reference PAHARI_EIJ_v1.1

    Range
    29545405..29579035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021214274.1 → XP_021069933.1  polycystic kidney disease 2-like 2 protein isoform X1

    Related
    MGP_PahariEiJ_P0038873, MGP_PahariEiJ_T0038873.1
    Conserved Domains (1) summary
    cl27887
    Location:76 → 497
    PKD_channel; Polycystin cation channel

  2. XM_021214275.1 → XP_021069934.1  polycystic kidney disease 2-like 2 protein isoform X1

    Related
    MGP_PahariEiJ_P0038872, MGP_PahariEiJ_T0038872.1
    Conserved Domains (1) summary
    cl27887
    Location:76 → 497
    PKD_channel; Polycystin cation channel

  3. XM_021214276.2 → XP_021069935.1  polycystic kidney disease 2-like 2 protein isoform X2

    Conserved Domains (1) summary
    cl27887
    Location:76 → 497
    PKD_channel; Polycystin cation channel
Nucleotide Protein
Heading Accession and Version

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