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Cdk12 cyclin dependent kinase 12 [ Mus pahari (shrew mouse) ]

Gene ID: 110331479, updated on 15-Mar-2024

Summary

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Gene symbol
Cdk12
Gene description
cyclin dependent kinase 12
See related
Ensembl:MGP_PahariEiJ_G0018206
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
18
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 14 NC_034603.1 (65621125..65696869)

Chromosome 14 - NC_034603.1Genomic Context describing neighboring genes Neighboring gene F-box and leucine rich repeat protein 20 Neighboring gene mediator complex subunit 1 Neighboring gene neuronal differentiation 2 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034603.1 Chromosome 14 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin/CDK positive transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034603.1 Reference PAHARI_EIJ_v1.1

    Range
    65621125..65696869
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029545690.1 → XP_029401550.1  cyclin-dependent kinase 12 isoform X4

    Conserved Domains (1) summary
    cd07864
    Location:715 → 1016
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

  2. XM_029545691.1 → XP_029401551.1  cyclin-dependent kinase 12 isoform X4

    Conserved Domains (1) summary
    cd07864
    Location:715 → 1016
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

  3. XM_021212124.2 → XP_021067783.1  cyclin-dependent kinase 12 isoform X1

    Related
    MGP_PahariEiJ_P0036350, MGP_PahariEiJ_T0036350.1
    Conserved Domains (1) summary
    cd07864
    Location:715 → 1016
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

  4. XM_021212125.2 → XP_021067784.1  cyclin-dependent kinase 12 isoform X3

    Related
    MGP_PahariEiJ_P0036348, MGP_PahariEiJ_T0036348.1
    Conserved Domains (1) summary
    cd07864
    Location:715 → 1016
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

  5. XM_029545689.1 → XP_029401549.1  cyclin-dependent kinase 12 isoform X2

    Conserved Domains (1) summary
    cd07864
    Location:714 → 1015
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

  6. XM_029545692.1 → XP_029401552.1  cyclin-dependent kinase 12 isoform X5

    Related
    MGP_PahariEiJ_P0036349, MGP_PahariEiJ_T0036349.1
    Conserved Domains (1) summary
    cd07864
    Location:715 → 1016
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12
Nucleotide Protein
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