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Catsper1 cation channel sperm associated 1 [ Mus pahari (shrew mouse) ]

Gene ID: 110329329, updated on 15-Mar-2024

Summary

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Gene symbol
Catsper1
Gene description
cation channel sperm associated 1
See related
Ensembl:MGP_PahariEiJ_G0014038
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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See Catsper1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 1 NC_034590.1 (116730643..116739954)

Chromosome 1 - NC_034590.1Genomic Context describing neighboring genes Neighboring gene galactose-3-O-sulfotransferase 3 Neighboring gene 60S ribosomal protein L37a-like Neighboring gene cystatin E/M Neighboring gene BAF nuclear assembly factor 1 Neighboring gene eukaryotic translation initiation factor 1A domain containing

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034590.1 Chromosome 1 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in flagellated sperm motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cilium beat frequency involved in ciliary motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CatSper complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cation channel sperm-associated protein 1
Names
sperm calcium channel 1
sperm protein CATSPER1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034590.1 Reference PAHARI_EIJ_v1.1

    Range
    116730643..116739954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021208931.1 → XP_021064590.1  cation channel sperm-associated protein 1

    Related
    MGP_PahariEiJ_P0020597, MGP_PahariEiJ_T0020597.1
    Conserved Domains (2) summary
    pfam17069
    Location:138 → 313
    RSRP; Arginine/Serine-Rich protein 1
    pfam00520
    Location:398 → 509
    Ion_trans; Ion transport protein
Nucleotide Protein
Heading Accession and Version

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