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Stx6 syntaxin 6 [ Mus pahari (shrew mouse) ]

Gene ID: 110321464, updated on 15-Mar-2024

Summary

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Gene symbol
Stx6
Gene description
syntaxin 6
See related
Ensembl:MGP_PahariEiJ_G0027959
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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See Stx6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 5 NC_034594.1 (128111669..128154452)

Chromosome 5 - NC_034594.1Genomic Context describing neighboring genes Neighboring gene cytosolic acyl coenzyme A thioester hydrolase-like Neighboring gene major histocompatibility complex class I-related gene protein Neighboring gene KIAA1614 ortholog Neighboring gene xenotropic and polytropic retrovirus receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034594.1 Chromosome 5 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034594.1 Reference PAHARI_EIJ_v1.1

    Range
    128111669..128154452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021197701.1 → XP_021053360.1  syntaxin-6

    Related
    MGP_PahariEiJ_P0075741, MGP_PahariEiJ_T0075741.1
    Conserved Domains (2) summary
    cd15851
    Location:166 → 231
    SNARE_Syntaxin6; SNARE motif of syntaxin 6
    pfam09177
    Location:13 → 103
    Syntaxin-6_N; Syntaxin 6, N-terminal
Nucleotide Protein
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