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Tgm5 transglutaminase 5 [ Mus pahari (shrew mouse) ]

Gene ID: 110318798, updated on 15-Mar-2024

Summary

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Gene symbol
Tgm5
Gene description
transglutaminase 5
See related
Ensembl:MGP_PahariEiJ_G0025622
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 3 NC_034592.1 (104474608..104514135, complement)

Chromosome 3 - NC_034592.1Genomic Context describing neighboring genes Neighboring gene cyclin D1 binding protein 1 Neighboring gene erythrocyte membrane protein band 4.2 Neighboring gene WW domain-binding protein 2 pseudogene Neighboring gene transglutaminase 7 Neighboring gene leucine carboxyl methyltransferase 2 Neighboring gene adenosine deaminase like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034592.1 Chromosome 3 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-glutamine gamma-glutamyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptide cross-linking IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-glutamine gamma-glutamyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034592.1 Reference PAHARI_EIJ_v1.1

    Range
    104474608..104514135 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021194067.1 → XP_021049726.1  protein-glutamine gamma-glutamyltransferase 5 isoform X1

    Related
    MGP_PahariEiJ_P0065048, MGP_PahariEiJ_T0065048.1
    Conserved Domains (3) summary
    smart00460
    Location:275 → 368
    TGc; Transglutaminase/protease-like homologues
    pfam00868
    Location:9 → 126
    Transglut_N; Transglutaminase family
    pfam00927
    Location:624 → 721
    Transglut_C; Transglutaminase family, C-terminal ig like domain

  2. XM_021194069.1 → XP_021049728.1  protein-glutamine gamma-glutamyltransferase 5 isoform X3

    Conserved Domains (3) summary
    smart00460
    Location:188 → 281
    TGc; Transglutaminase/protease-like homologues
    pfam00868
    Location:4 → 63
    Transglut_N; Transglutaminase family
    pfam00927
    Location:537 → 634
    Transglut_C; Transglutaminase family, C-terminal ig like domain

  3. XM_021194068.1 → XP_021049727.1  protein-glutamine gamma-glutamyltransferase 5 isoform X2

    Conserved Domains (3) summary
    smart00460
    Location:270 → 363
    TGc; Transglutaminase/protease-like homologues
    pfam00868
    Location:4 → 121
    Transglut_N; Transglutaminase family
    pfam00927
    Location:619 → 716
    Transglut_C; Transglutaminase family, C-terminal ig like domain
Nucleotide Protein
Heading Accession and Version

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