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Styxl1 serine/threonine/tyrosine interacting like 1 [ Mus pahari (shrew mouse) ]

Gene ID: 110313057, updated on 15-Mar-2024

Summary

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Gene symbol
Styxl1
Gene description
serine/threonine/tyrosine interacting like 1
See related
Ensembl:MGP_PahariEiJ_G0024423
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
10
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 23 NC_034612.1 (25928462..25955525, complement)

Chromosome 23 - NC_034612.1Genomic Context describing neighboring genes Neighboring gene NADPH--cytochrome P450 reductase Neighboring gene transmembrane protein 120A Neighboring gene malate dehydrogenase 2 Neighboring gene serine/arginine repetitive matrix 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034612.1 Chromosome 23 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudophosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of stress granule assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine/tyrosine-interacting-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034612.1 Reference PAHARI_EIJ_v1.1

    Range
    25928462..25955525 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021187087.1 → XP_021042746.1  serine/threonine/tyrosine-interacting-like protein 1 isoform X3

    Related
    MGP_PahariEiJ_P0059587, MGP_PahariEiJ_T0059587.1
    Conserved Domains (1) summary
    cl28904
    Location:103 → 207
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  2. XM_021187083.2 → XP_021042742.1  serine/threonine/tyrosine-interacting-like protein 1 isoform X1

    Related
    MGP_PahariEiJ_P0059584, MGP_PahariEiJ_T0059584.1
    Conserved Domains (2) summary
    cl00125
    Location:33 → 146
    RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
    cl21483
    Location:168 → 305
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  3. XM_021187086.1 → XP_021042745.1  serine/threonine/tyrosine-interacting-like protein 1 isoform X4

    Conserved Domains (1) summary
    cl28904
    Location:55 → 207
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  4. XM_021187084.1 → XP_021042743.1  serine/threonine/tyrosine-interacting-like protein 1 isoform X2

    Conserved Domains (2) summary
    cl00125
    Location:33 → 141
    RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
    cl21483
    Location:163 → 300
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
Nucleotide Protein
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