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Asb13 ankyrin repeat and SOCS box containing 13 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110307955, updated on 15-Mar-2024

Summary

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Gene symbol
Asb13
Gene description
ankyrin repeat and SOCS box containing 13
See related
Ensembl:MGP_CAROLIEiJ_G0018193
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 13 NC_034582.1 (166688..185877)

Chromosome 13 - NC_034582.1Genomic Context describing neighboring genes Neighboring gene GDP dissociation inhibitor 2 Neighboring gene transcription activation suppressor family member 2 Neighboring gene transcription initiation factor IIA subunit 2 pseudogene Neighboring gene calmodulin like 3 Neighboring gene calmodulin-4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034582.1 Chromosome 13 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034582.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    166688..185877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021180263.2 → XP_021035922.1  ankyrin repeat and SOCS box protein 13

    UniProtKB/TrEMBL
    A0A6P5QYW6
    Related
    MGP_CAROLIEiJ_P0033571, MGP_CAROLIEiJ_T0033571.1
    Conserved Domains (4) summary
    cd00204
    Location:46 → 170
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd03729
    Location:237 → 278
    SOCS_ASB13; SOCS (suppressors of cytokine signaling) box of ASB13-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. ...
    sd00045
    Location:119 → 147
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:152 → 202
    Ank_4; Ankyrin repeats (many copies)
Nucleotide Protein
Heading Accession and Version

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