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Gpatch8 G-patch domain containing 8 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110305290, updated on 15-Mar-2024

Summary

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Gene symbol
Gpatch8
Gene description
G-patch domain containing 8
See related
Ensembl:MGP_CAROLIEiJ_G0017255
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 11 NC_034580.1 (98431662..98508671, complement)

Chromosome 11 - NC_034580.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 171 member A2 Neighboring gene integrin subunit alpha 2b Neighboring gene midkine pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC110304231 Neighboring gene frizzled class receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034580.1 Chromosome 11 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G patch domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034580.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    98431662..98508671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021177201.2 → XP_021032860.1  G patch domain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A6P5QHN4
    Related
    MGP_CAROLIEiJ_P0030278, MGP_CAROLIEiJ_T0030278.1
    Conserved Domains (3) summary
    pfam01585
    Location:40 → 82
    G-patch; G-patch domain
    pfam12171
    Location:136 → 163
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    cl25732
    Location:82 → 207
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_029483228.1 → XP_029339088.1  G patch domain-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    A0A6P7RD07
    Conserved Domains (2) summary
    PRK03918
    Location:4 → 129
    PRK03918; DNA double-strand break repair ATPase Rad50
    pfam12171
    Location:58 → 85
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding

  3. XM_029483229.1 → XP_029339089.1  G patch domain-containing protein 8 isoform X3

    UniProtKB/TrEMBL
    A0A6P7RH63
    Related
    MGP_CAROLIEiJ_T0030279.1
Nucleotide Protein
Heading Accession and Version

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