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Whamm WASP homolog associated with actin, golgi membranes and microtubules [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110299011, updated on 15-Mar-2024

Summary

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Gene symbol
Whamm
Gene description
WASP homolog associated with actin, golgi membranes and microtubules
See related
Ensembl:MGP_CAROLIEiJ_G0029923
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 7 NC_034576.1 (84134428..84168483)

Chromosome 7 - NC_034576.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110298792 Neighboring gene small Cajal body-specific RNA 15 Neighboring gene fibronectin type III and SPRY domain containing 2 Neighboring gene homer scaffold protein 2 Neighboring gene RNA guanine-7 methyltransferase activating subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034576.1 Chromosome 7 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Arp2/3 complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASP homolog-associated protein with actin, membranes and microtubules
Names
WAS protein homolog associated with actin, golgi membranes and microtubules

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034576.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    84134428..84168483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021168583.2 → XP_021024242.1  WASP homolog-associated protein with actin, membranes and microtubules

    UniProtKB/TrEMBL
    A0A6P5QAI3
    Related
    MGP_CAROLIEiJ_P0080474, MGP_CAROLIEiJ_T0080474.1
    Conserved Domains (2) summary
    pfam15871
    Location:67 → 435
    JMY; Junction-mediating and -regulatory protein
    pfam15920
    Location:5 → 51
    WHAMM-JMY_N; N-terminal of Junction-mediating and WASP homolog-associated
Nucleotide Protein
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