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Epb41l5 erythrocyte membrane protein band 4.1 like 5 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110298954, updated on 15-Mar-2024

Summary

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Gene symbol
Epb41l5
Gene description
erythrocyte membrane protein band 4.1 like 5
See related
Ensembl:MGP_CAROLIEiJ_G0014514
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
27
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 1 NC_034570.1 (111582169..111682225, complement)

Chromosome 1 - NC_034570.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane protein 185B Neighboring gene protein tyrosine phosphatase non-receptor type 4 Neighboring gene platelet-activating factor acetylhydrolase IB subunit alpha pseudogene Neighboring gene 60S acidic ribosomal protein P0-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034570.1 Chromosome 1 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
band 4.1-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034570.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    111582169..111682225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029474204.1 → XP_029330064.1  band 4.1-like protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A6P7QTW3

  2. XM_021168536.2 → XP_021024195.1  band 4.1-like protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A6P7QM36
    Related
    MGP_CAROLIEiJ_P0019477, MGP_CAROLIEiJ_T0019477.1
    Conserved Domains (4) summary
    smart00295
    Location:44 → 235
    B41; Band 4.1 homologues
    cd13186
    Location:231 → 324
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    cd17205
    Location:41 → 126
    FERM_F1_EPB41L5; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in erythrocyte membrane protein band 4.1-like 5 (EPB41L5)
    pfam08736
    Location:337 → 377
    FA; FERM adjacent (FA)

  3. XM_029474198.1 → XP_029330058.1  band 4.1-like protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A6P7QM36
    Conserved Domains (4) summary
    smart00295
    Location:44 → 235
    B41; Band 4.1 homologues
    cd13186
    Location:231 → 324
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    cd17205
    Location:41 → 126
    FERM_F1_EPB41L5; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in erythrocyte membrane protein band 4.1-like 5 (EPB41L5)
    pfam08736
    Location:337 → 377
    FA; FERM adjacent (FA)

  4. XM_021168617.2 → XP_021024276.1  band 4.1-like protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A6P7QM36
    Conserved Domains (4) summary
    smart00295
    Location:44 → 235
    B41; Band 4.1 homologues
    cd13186
    Location:231 → 324
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    cd17205
    Location:41 → 126
    FERM_F1_EPB41L5; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in erythrocyte membrane protein band 4.1-like 5 (EPB41L5)
    pfam08736
    Location:337 → 377
    FA; FERM adjacent (FA)

  5. XM_021168691.1 → XP_021024350.1  band 4.1-like protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A6P5Q4E0
    Related
    MGP_CAROLIEiJ_P0019481, MGP_CAROLIEiJ_T0019481.1
    Conserved Domains (4) summary
    smart00295
    Location:44 → 235
    B41; Band 4.1 homologues
    cd13186
    Location:231 → 324
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    cd17205
    Location:41 → 126
    FERM_F1_EPB41L5; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in erythrocyte membrane protein band 4.1-like 5 (EPB41L5)
    pfam08736
    Location:337 → 377
    FA; FERM adjacent (FA)

  6. XM_021168769.2 → XP_021024428.1  band 4.1-like protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A6P5Q4E0
    Related
    MGP_CAROLIEiJ_P0019482, MGP_CAROLIEiJ_T0019482.1
    Conserved Domains (4) summary
    smart00295
    Location:44 → 235
    B41; Band 4.1 homologues
    cd13186
    Location:231 → 324
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    cd17205
    Location:41 → 126
    FERM_F1_EPB41L5; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in erythrocyte membrane protein band 4.1-like 5 (EPB41L5)
    pfam08736
    Location:337 → 377
    FA; FERM adjacent (FA)
Nucleotide Protein
Heading Accession and Version

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