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Grin2b glutamate ionotropic receptor NMDA type subunit 2B [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110296148, updated on 15-Mar-2024

Summary

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Gene symbol
Grin2b
Gene description
glutamate ionotropic receptor NMDA type subunit 2B
See related
Ensembl:MGP_CAROLIEiJ_G0028994
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 6 NC_034575.1 (133719355..134169572, complement)

Chromosome 6 - NC_034575.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA36 family Neighboring gene uncharacterized LOC110295569 Neighboring gene U2 spliceosomal RNA Neighboring gene eukaryotic initiation factor 4A-III-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034575.1 Chromosome 6 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NMDA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in excitatory postsynaptic potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic potentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NMDA selective glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor ionotropic, NMDA 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034575.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    133719355..134169572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021164703.2 → XP_021020362.1  glutamate receptor ionotropic, NMDA 2B

    UniProtKB/TrEMBL
    A0A6P7RAZ1
    Conserved Domains (3) summary
    cd13718
    Location:403 → 803
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:840 → 1482
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
    cd06378
    Location:33 → 388
    PBP1_iGluR_NMDA_NR2; N-terminal leucine-isoleucine-valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family

  2. XM_021164705.2 → XP_021020364.1  glutamate receptor ionotropic, NMDA 2B

    UniProtKB/TrEMBL
    A0A6P7RAZ1
    Related
    MGP_CAROLIEiJ_P0076508, MGP_CAROLIEiJ_T0076508.1
    Conserved Domains (3) summary
    cd13718
    Location:403 → 803
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:840 → 1482
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
    cd06378
    Location:33 → 388
    PBP1_iGluR_NMDA_NR2; N-terminal leucine-isoleucine-valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family

  3. XM_029478515.1 → XP_029334375.1  glutamate receptor ionotropic, NMDA 2B

    UniProtKB/TrEMBL
    A0A6P7RAZ1
    Conserved Domains (3) summary
    cd13718
    Location:403 → 803
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:840 → 1482
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
    cd06378
    Location:33 → 388
    PBP1_iGluR_NMDA_NR2; N-terminal leucine-isoleucine-valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family

  4. XM_029478514.1 → XP_029334374.1  glutamate receptor ionotropic, NMDA 2B

    UniProtKB/TrEMBL
    A0A6P7RAZ1
    Related
    MGP_CAROLIEiJ_P0076507, MGP_CAROLIEiJ_T0076507.1
    Conserved Domains (3) summary
    cd13718
    Location:403 → 803
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:840 → 1482
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
    cd06378
    Location:33 → 388
    PBP1_iGluR_NMDA_NR2; N-terminal leucine-isoleucine-valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family

  5. XM_029478516.1 → XP_029334376.1  glutamate receptor ionotropic, NMDA 2B

    UniProtKB/TrEMBL
    A0A6P7RAZ1
    Conserved Domains (3) summary
    cd13718
    Location:403 → 803
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:840 → 1482
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
    cd06378
    Location:33 → 388
    PBP1_iGluR_NMDA_NR2; N-terminal leucine-isoleucine-valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
Nucleotide Protein
Heading Accession and Version

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