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Pld5 phospholipase D family member 5 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110291682, updated on 15-Mar-2024

Summary

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Gene symbol
Pld5
Gene description
phospholipase D family member 5
See related
Ensembl:MGP_CAROLIEiJ_G0014950
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 1 NC_034570.1 (166050156..166373974, complement)

Chromosome 1 - NC_034570.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein 8A pseudogene Neighboring gene exonuclease 1 Neighboring gene beclin 2 Neighboring gene 60S ribosomal protein L35a pseudogene Neighboring gene centrosomal protein 170 Neighboring gene SHH signaling and ciliogenesis regulator SDCCAG8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034570.1 Chromosome 1 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive phospholipase D5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034570.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    166050156..166373974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021158929.2 → XP_021014588.1  inactive phospholipase D5 isoform X1

    UniProtKB/TrEMBL
    A0A6P5PG46
    Related
    MGP_CAROLIEiJ_P0021460, MGP_CAROLIEiJ_T0021460.1
    Conserved Domains (2) summary
    cd09146
    Location:111 → 273
    PLDc_vPLD5_1; Putative catalytic domain, repeat 1, of inactive veterbrate phospholipase PLD5
    cd09149
    Location:309 → 502
    PLDc_vPLD5_2; Putative catalytic domain, repeat 2, of inactive veterbrate phospholipase PLD5

  2. XM_029483515.1 → XP_029339375.1  inactive phospholipase D5 isoform X3

    UniProtKB/TrEMBL
    A0A6P7RWK2

  3. XM_021158940.2 → XP_021014599.1  inactive phospholipase D5 isoform X2

    UniProtKB/TrEMBL
    A0A6P5PJ17
    Related
    MGP_CAROLIEiJ_P0021462, MGP_CAROLIEiJ_T0021462.1
    Conserved Domains (2) summary
    cd09146
    Location:49 → 211
    PLDc_vPLD5_1; Putative catalytic domain, repeat 1, of inactive veterbrate phospholipase PLD5
    cd09149
    Location:247 → 440
    PLDc_vPLD5_2; Putative catalytic domain, repeat 2, of inactive veterbrate phospholipase PLD5

  4. XM_029483521.1 → XP_029339381.1  inactive phospholipase D5 isoform X3

    UniProtKB/TrEMBL
    A0A6P7RWK2

  5. XM_029483532.1 → XP_029339392.1  inactive phospholipase D5 isoform X5

    UniProtKB/TrEMBL
    A0A6P7RDY7
    Conserved Domains (2) summary
    cd09149
    Location:101 → 294
    PLDc_vPLD5_2; Putative catalytic domain, repeat 2, of inactive veterbrate phospholipase PLD5
    cl15239
    Location:1 → 65
    PLDc_SF; Catalytic domain of phospholipase D superfamily proteins

  6. XM_029483526.1 → XP_029339386.1  inactive phospholipase D5 isoform X4

    UniProtKB/TrEMBL
    A0A6P7RVT8

  7. XM_029483533.1 → XP_029339393.1  inactive phospholipase D5 isoform X5

    UniProtKB/TrEMBL
    A0A6P7RDY7
    Conserved Domains (2) summary
    cd09149
    Location:101 → 294
    PLDc_vPLD5_2; Putative catalytic domain, repeat 2, of inactive veterbrate phospholipase PLD5
    cl15239
    Location:1 → 65
    PLDc_SF; Catalytic domain of phospholipase D superfamily proteins
Nucleotide Protein
Heading Accession and Version

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