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Ythdf3 YTH N6-methyladenosine RNA binding protein F3 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110290717, updated on 15-Mar-2024

Summary

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Gene symbol
Ythdf3
Gene description
YTH N6-methyladenosine RNA binding protein F3
See related
Ensembl:MGP_CAROLIEiJ_G0024863
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 3 NC_034572.1 (11675758..11705499)

Chromosome 3 - NC_034572.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit M-like Neighboring gene signal-regulatory protein beta-1-like Neighboring gene polyadenylate-binding protein 4-like Neighboring gene transfer RNA glycine (anticodon GCC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034572.1 Chromosome 3 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N6-methyladenosine-containing RNA reader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA destabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
YTH domain-containing family protein 3
Names
YTH N6-methyladenosine RNA binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034572.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    11675758..11705499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021157369.2 → XP_021013028.1  YTH domain-containing family protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6P5PEF6
    Related
    MGP_CAROLIEiJ_P0056977, MGP_CAROLIEiJ_T0056977.1
    Conserved Domains (1) summary
    pfam04146
    Location:420 → 553
    YTH; YT521-B-like domain

  2. XM_021157368.2 → XP_021013027.1  YTH domain-containing family protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A6P5PF41
    Related
    MGP_CAROLIEiJ_P0056978, MGP_CAROLIEiJ_T0056978.1
    Conserved Domains (1) summary
    pfam04146
    Location:428 → 561
    YTH; YT521-B-like domain

  3. XM_021157370.2 → XP_021013029.1  YTH domain-containing family protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A6P5P8D4
    Related
    MGP_CAROLIEiJ_P0056975, MGP_CAROLIEiJ_T0056975.1
    Conserved Domains (1) summary
    pfam04146
    Location:417 → 550
    YTH; YT521-B-like domain

  4. XM_021157366.2 → XP_021013025.1  YTH domain-containing family protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A6P5PCR2
    Conserved Domains (1) summary
    pfam04146
    Location:431 → 564
    YTH; YT521-B-like domain

  5. XM_021157367.2 → XP_021013026.1  YTH domain-containing family protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A6P5PCR2
    Conserved Domains (1) summary
    pfam04146
    Location:431 → 564
    YTH; YT521-B-like domain
Nucleotide Protein
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