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Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110289975, updated on 15-Mar-2024

Summary

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Gene symbol
Raph1
Gene description
Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
See related
Ensembl:MGP_CAROLIEiJ_G0014190
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 1 NC_034570.1 (54630747..54711534, complement)

Chromosome 1 - NC_034570.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 20A1 Neighboring gene abl interactor 2 Neighboring gene uncharacterized LOC115030854 Neighboring gene protein-arginine deiminase type-6 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034570.1 Chromosome 1 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-associated and pleckstrin homology domains-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034570.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    54630747..54711534 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029479579.1 → XP_029335439.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A6P7R7N9
    Related
    MGP_CAROLIEiJ_P0017939, MGP_CAROLIEiJ_T0017939.1

  2. XM_029479578.1 → XP_029335438.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A6P7R2P7
    Related
    MGP_CAROLIEiJ_P0017937, MGP_CAROLIEiJ_T0017937.1
    Conserved Domains (2) summary
    cd01259
    Location:393 → 515
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:268 → 357
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)

  3. XM_029479577.1 → XP_029335437.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A6P7R4C8

  4. XM_029479575.1 → XP_029335435.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P7RER7
    Conserved Domains (2) summary
    cd01259
    Location:420 → 542
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:295 → 384
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)

  5. XM_029479574.1 → XP_029335434.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7R7N5
    Conserved Domains (2) summary
    cd01259
    Location:445 → 567
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    cd16136
    Location:320 → 409
    RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)

  6. XM_029479580.1 → XP_029335440.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A6P7RES2

RNA

  1. XR_003837169.1 RNA Sequence

  2. XR_003837168.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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