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Cdc5l cell division cycle 5 like [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110283906, updated on 15-Mar-2024

Summary

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Gene symbol
Cdc5l
Gene description
cell division cycle 5 like
See related
Ensembl:MGP_CAROLIEiJ_G0021641
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Cdc5l in Genome Data Viewer
Location:
chromosome: 17
Exon count:
16
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 17 NC_034586.1 (42089365..42131347, complement)

Chromosome 17 - NC_034586.1Genomic Context describing neighboring genes Neighboring gene SPT3 homolog, SAGA and STAGA complex component Neighboring gene uncharacterized LOC110312499 Neighboring gene splicing factor YJU2-like Neighboring gene Friend virus susceptibility protein 1-like Neighboring gene spermatogenesis associated serine rich 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034586.1 Chromosome 17 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division cycle 5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034586.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    42089365..42131347 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021149453.2 → XP_021005112.1  cell division cycle 5-like protein

    UniProtKB/TrEMBL
    A0A6P5NTM8
    Related
    MGP_CAROLIEiJ_P0044871, MGP_CAROLIEiJ_T0044871.1
    Conserved Domains (3) summary
    COG5147
    Location:6 → 303
    REB1; Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning]
    pfam11831
    Location:404 → 655
    Myb_Cef; pre-mRNA splicing factor component
    cl25732
    Location:627 → 801
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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