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KCTD15 potassium channel tetramerization domain containing 15 [ Sus scrofa (pig) ]

Gene ID: 110260977, updated on 15-Mar-2024

Summary

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Official Symbol
KCTD15provided by VGNC
Official Full Name
potassium channel tetramerization domain containing 15provided by VGNC
Primary source
VGNC:VGNC:89394
See related
Ensembl:ENSSSCG00000033695
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 11.5), spleen (RPKM 10.0) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (43528677..43545834)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106508476 Neighboring gene uncharacterized LOC102158826 Neighboring gene uncharacterized LOC100623157 Neighboring gene 60S ribosomal protein L22-like 1 pseudogene Neighboring gene uncharacterized LOC110255282

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010448.4 Chromosome 6 Reference Sscrofa11.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BTB/POZ domain-containing protein KCTD15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    43528677..43545834
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021094315.1 → XP_020949974.1  BTB/POZ domain-containing protein KCTD15

    UniProtKB/TrEMBL
    A0A287BRD9, A0A6M8PKK0, A0A8D0RUT0
    Conserved Domains (1) summary
    cl02518
    Location:58 → 145
    BTB; BTB/POZ domain

  2. XM_021094316.1 → XP_020949975.1  BTB/POZ domain-containing protein KCTD15

    UniProtKB/TrEMBL
    A0A287BRD9, A0A6M8PKK0, A0A8D0RUT0
    Conserved Domains (1) summary
    cl02518
    Location:58 → 145
    BTB; BTB/POZ domain

  3. XM_021094317.1 → XP_020949976.1  BTB/POZ domain-containing protein KCTD15

    UniProtKB/TrEMBL
    A0A287BRD9, A0A6M8PKK0, A0A8D0RUT0
    Related
    ENSSSCP00000058684.1, ENSSSCT00000049953.2
    Conserved Domains (1) summary
    cl02518
    Location:58 → 145
    BTB; BTB/POZ domain

  4. XM_021094318.1 → XP_020949977.1  BTB/POZ domain-containing protein KCTD15

    UniProtKB/TrEMBL
    A0A287BRD9, A0A6M8PKK0, A0A8D0RUT0
    Conserved Domains (1) summary
    cl02518
    Location:58 → 145
    BTB; BTB/POZ domain

  5. XM_021094319.1 → XP_020949978.1  BTB/POZ domain-containing protein KCTD15

    UniProtKB/TrEMBL
    A0A287BRD9, A0A6M8PKK0, A0A8D0RUT0
    Conserved Domains (1) summary
    cl02518
    Location:58 → 145
    BTB; BTB/POZ domain
Nucleotide Protein
Heading Accession and Version

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