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SIVA1 SIVA1 apoptosis inducing factor [ Sus scrofa (pig) ]

Gene ID: 110258343, updated on 15-Mar-2024

Summary

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Gene symbol
SIVA1
Gene description
SIVA1 apoptosis inducing factor
See related
Ensembl:ENSSSCG00000031132
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in heart (RPKM 72.8), ovary (RPKM 48.8) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) Unplaced Scaffold NW_018084979.1 (3029782..3034647)

NW_018084979.1Genomic Context describing neighboring genes Neighboring gene inverted formin 2 Neighboring gene adenylosuccinate synthase 1 Neighboring gene AKT serine/threonine kinase 1 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene zinc finger and BTB domain containing 42

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018084979 Unplaced Scaffold Reference Sscrofa11.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CD27 receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apoptosis regulatory protein Siva

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NW_018084979.1 Reference Sscrofa11.1 Primary Assembly

    Range
    3029782..3034647
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021081564.1 → XP_020937223.1  apoptosis regulatory protein Siva

    UniProtKB/TrEMBL
    A0A4X1TTD3, A0A5G2Q798, A0A8D1SZX2, M3VK34
    Related
    ENSSSCP00000059665.2, ENSSSCT00000091461.2
    Conserved Domains (1) summary
    pfam05458
    Location:1 → 175
    Siva; Cd27 binding protein (Siva)
Nucleotide Protein Strain
Heading Accession and Version

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