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PTPN9 protein tyrosine phosphatase non-receptor type 9 [ Phascolarctos cinereus (koala) ]

Gene ID: 110213908, updated on 15-Mar-2024

Summary

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Gene symbol
PTPN9
Gene description
protein tyrosine phosphatase non-receptor type 9
See related
Ensembl:ENSPCIG00000007847
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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See PTPN9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344009.1 (2066669..2134611)

NW_018344009.1Genomic Context describing neighboring genes Neighboring gene snurportin 1 Neighboring gene uncharacterized LOC110213909 Neighboring gene SIN3 transcription regulator family member A Neighboring gene mannosidase alpha class 2C member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344009 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344009.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    2066669..2134611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020994465.1 → XP_020850124.1  tyrosine-protein phosphatase non-receptor type 9 isoform X1

    UniProtKB/TrEMBL
    A0A6P5L027
    Related
    ENSPCIP00000009612.1, ENSPCIT00000012069.2
    Conserved Domains (3) summary
    smart00194
    Location:310 → 581
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart01100
    Location:28 → 76
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:102 → 246
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

  2. XM_020994467.1 → XP_020850126.1  tyrosine-protein phosphatase non-receptor type 9 isoform X2

    UniProtKB/TrEMBL
    A0A6P5KW28
    Related
    ENSPCIP00000047952.1, ENSPCIT00000064347.1
    Conserved Domains (2) summary
    smart00194
    Location:251 → 522
    PTPc; Protein tyrosine phosphatase, catalytic domain
    pfam00650
    Location:42 → 186
    CRAL_TRIO; CRAL/TRIO domain

  3. XM_020994466.1 → XP_020850125.1  tyrosine-protein phosphatase non-receptor type 9 isoform X2

    UniProtKB/TrEMBL
    A0A6P5KW28
    Conserved Domains (2) summary
    smart00194
    Location:251 → 522
    PTPc; Protein tyrosine phosphatase, catalytic domain
    pfam00650
    Location:42 → 186
    CRAL_TRIO; CRAL/TRIO domain
Nucleotide Protein
Heading Accession and Version

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