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ABI1 abl interactor 1 [ Phascolarctos cinereus (koala) ]

Gene ID: 110211159, updated on 15-Mar-2024

Summary

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Gene symbol
ABI1
Gene description
abl interactor 1
See related
Ensembl:ENSPCIG00000014619
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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See ABI1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018343990.1 (17720889..17826845)

NW_018343990.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA binding domain containing 5 Neighboring gene SNW domain-containing protein 1 pseudogene Neighboring gene syncytin-1-like Neighboring gene decaprenyl diphosphate synthase subunit 1 Neighboring gene UPF0061 protein ETA_18310-like Neighboring gene amyloid beta precursor protein binding family B member 1 interacting protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018343990 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
abl interactor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018343990.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    17720889..17826845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020990326.1 → XP_020845985.1  abl interactor 1 isoform X3

    UniProtKB/TrEMBL
    A0A6P5KJZ3
    Related
    ENSPCIP00000048795.1, ENSPCIT00000055928.1
    Conserved Domains (2) summary
    cd11971
    Location:423 → 481
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 169
    Abi_HHR; Abl-interactor HHR

  2. XM_020990329.1 → XP_020845988.1  abl interactor 1 isoform X6

    UniProtKB/TrEMBL
    A0A6P5KK38
    Related
    ENSPCIP00000019136.2, ENSPCIT00000023614.2
    Conserved Domains (2) summary
    cd11971
    Location:394 → 452
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 169
    Abi_HHR; Abl-interactor HHR

  3. XM_020990327.1 → XP_020845986.1  abl interactor 1 isoform X4

    UniProtKB/TrEMBL
    A0A6P5KNL9
    Related
    ENSPCIP00000042488.1, ENSPCIT00000068335.1
    Conserved Domains (2) summary
    cd11971
    Location:335 → 393
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 169
    Abi_HHR; Abl-interactor HHR

  4. XM_020990324.1 → XP_020845983.1  abl interactor 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P5KK33
    Related
    ENSPCIP00000047550.1, ENSPCIT00000066081.1
    Conserved Domains (2) summary
    cd11971
    Location:418 → 476
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 164
    Abi_HHR; Abl-interactor HHR

  5. XM_020990325.1 → XP_020845984.1  abl interactor 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P5KLW2
    Conserved Domains (2) summary
    cd11971
    Location:389 → 447
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 164
    Abi_HHR; Abl-interactor HHR

  6. XM_020990328.1 → XP_020845987.1  abl interactor 1 isoform X5

    UniProtKB/TrEMBL
    A0A6P5KMV2
    Conserved Domains (2) summary
    cd11971
    Location:330 → 388
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 164
    Abi_HHR; Abl-interactor HHR
Nucleotide Protein
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