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GLI3 GLI family zinc finger 3 [ Phascolarctos cinereus (koala) ]

Gene ID: 110192951, updated on 15-Mar-2024

Summary

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Gene symbol
GLI3
Gene description
GLI family zinc finger 3
See related
Ensembl:ENSPCIG00000027591
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344104.1 (3657618..3941249, complement)

NW_018344104.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L36-like Neighboring gene inhibin subunit beta A Neighboring gene chromosome unknown C7orf25 homolog Neighboring gene proteasome 20S subunit alpha 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344104 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional activator GLI3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344104.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    3657618..3941249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020964429.1 → XP_020820088.1  transcriptional activator GLI3 isoform X1

    UniProtKB/TrEMBL
    A0A6P5IG36
    Related
    ENSPCIP00000053395.1, ENSPCIT00000067263.1
    Conserved Domains (2) summary
    COG5189
    Location:545 → 635
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:551 → 573
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_020964430.1 → XP_020820089.1  transcriptional activator GLI3 isoform X2

    UniProtKB/TrEMBL
    A0A6P5IN56
    Related
    ENSPCIP00000037454.2, ENSPCIT00000046117.2
    Conserved Domains (2) summary
    COG5189
    Location:486 → 576
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:492 → 514
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_020964432.1 → XP_020820091.1  transcriptional activator GLI3 isoform X3

    UniProtKB/TrEMBL
    A0A6P5IMI9
    Conserved Domains (2) summary
    COG5189
    Location:425 → 515
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:431 → 453
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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