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parp1 poly (ADP-ribose) polymerase 1 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110173719, updated on 15-Mar-2024

Summary

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Gene symbol
parp1
Gene description
poly (ADP-ribose) polymerase 1
Locus tag
NL108_001723
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571036.1 (18250668..18259453, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018345858.1 (9792196..9800794)

NW_026571036.1Genomic Context describing neighboring genes Neighboring gene acyl-Coenzyme A binding domain containing 3 Neighboring gene Mix paired-like homeobox Neighboring gene lin-9 DREAM MuvB core complex component Neighboring gene adenylate cyclase type 8 Neighboring gene adenosine receptor A2a-like Neighboring gene protein EFR3 homolog B Neighboring gene pro-opiomelanocortin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD+ ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
poly [ADP-ribose] polymerase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571036.1 Reference ASM2622593v1 Primary Assembly

    Range
    18250668..18259453 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020939827.2 → XP_020795486.1  poly [ADP-ribose] polymerase 1 isoform X2

    Conserved Domains (1) summary
    cl27333
    Location:7 → 1008
    PARP_reg; Poly(ADP-ribose) polymerase, regulatory domain

  2. XM_020939765.2 → XP_020795424.1  poly [ADP-ribose] polymerase 1 isoform X1

    Conserved Domains (1) summary
    cl27333
    Location:7 → 1009
    PARP_reg; Poly(ADP-ribose) polymerase, regulatory domain
Nucleotide Protein
Heading Accession and Version

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