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atp8b1 ATPase phospholipid transporting 8B1 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110172470, updated on 15-Mar-2024

Summary

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Gene symbol
atp8b1
Gene description
ATPase phospholipid transporting 8B1
Locus tag
NL108_011588
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571133.1 (43560848..43598706, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018360024.1 (3492018..3529414, complement)

NW_026571133.1Genomic Context describing neighboring genes Neighboring gene transcription factor 4 Neighboring gene thioredoxin-like 1 Neighboring gene 5S ribosomal RNA Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25-like Neighboring gene uncharacterized histidine-rich protein DDB_G0274557-like Neighboring gene RAB27B, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid-transporting ATPase IC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571133.1 Reference ASM2622593v1 Primary Assembly

    Range
    43560848..43598706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020938346.2 → XP_020794005.1  phospholipid-transporting ATPase IC

    Conserved Domains (1) summary
    cd02073
    Location:91 → 1044
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
Nucleotide Protein
Heading Accession and Version

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