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stx17 syntaxin 17 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110171562, updated on 15-Mar-2024

Summary

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Gene symbol
stx17
Gene description
syntaxin 17
Locus tag
NL108_001187
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571447.1 (26984567..26995245)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018359358.1 (11672387..11683049)

NW_026571447.1Genomic Context describing neighboring genes Neighboring gene SEC61 translocon subunit beta Neighboring gene nuclear receptor subfamily 4, group A, member 3 Neighboring gene endoplasmic reticulum protein 44 Neighboring gene inversin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in autophagosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571447.1 Reference ASM2622593v1 Primary Assembly

    Range
    26984567..26995245
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020937289.2 → XP_020792948.1  syntaxin-17

    Conserved Domains (1) summary
    cd15846
    Location:158 → 219
    SNARE_syntaxin17; SNARE motif of syntaxin 17
Nucleotide Protein
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Gene LinkOut

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