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klf12b Kruppel-like factor 12b [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110170620, updated on 15-Mar-2024

Summary

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Gene symbol
klf12b
Gene description
Kruppel-like factor 12b
Locus tag
NL108_002383
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Also known as
klf12
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026570970.1 (20025238..20059541)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018358718.1 (986322..1017472)

NW_026570970.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 6 Neighboring gene TBC1 domain family, member 4 Neighboring gene dachshund d Neighboring gene G protein-coupled receptor 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 12b
Names
Kruppel like factor 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026570970.1 Reference ASM2622593v1 Primary Assembly

    Range
    20025238..20059541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020936298.2 → XP_020791957.1  Krueppel-like factor 12b

    Conserved Domains (4) summary
    COG5048
    Location:161 → 350
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:268 → 290
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:312 → 337
    zf-H2C2_2; Zinc-finger double domain
    cl40450
    Location:8 → 193
    KLF8_12_N; N-terminal domain of Kruppel-like factor (KLF) 8, KLF12, and similar proteins

  2. XM_055148594.1 → XP_055004569.1  Krueppel-like factor 12b

  3. XM_055148606.1 → XP_055004581.1  Krueppel-like factor 12b

RNA

  1. XR_008631552.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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