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idh1 isocitrate dehydrogenase (NADP(+)) 1 [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110170564, updated on 15-Mar-2024

Summary

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Gene symbol
idh1
Gene description
isocitrate dehydrogenase (NADP(+)) 1
Locus tag
NL108_002385
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026570970.1 (21404611..21411066, complement)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018358718.1 (2430763..2436467, complement)

NW_026570970.1Genomic Context describing neighboring genes Neighboring gene TNF superfamily member 11 Neighboring gene epithelial stromal interaction 1 Neighboring gene potassium voltage-gated channel, subfamily H (eag-related), member 3 Neighboring gene armadillo repeat containing 8 Neighboring gene debranching RNA lariats 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isocitrate dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NADP] cytoplasmic
Names
isocitrate dehydrogenase (NADP(+)) 1, cytosolic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026570970.1 Reference ASM2622593v1 Primary Assembly

    Range
    21404611..21411066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020936216.2 → XP_020791875.1  isocitrate dehydrogenase [NADP] cytoplasmic

    Conserved Domains (1) summary
    PTZ00435
    Location:1 → 409
    PTZ00435; isocitrate dehydrogenase; Provisional
Nucleotide Protein
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