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kptn kaptin (actin binding protein) [ Boleophthalmus pectinirostris (great blue-spotted mudskipper) ]

Gene ID: 110169082, updated on 15-Mar-2024

Summary

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Gene symbol
kptn
Gene description
kaptin (actin binding protein)
Locus tag
NL108_001963
Gene type
protein coding
RefSeq status
MODEL
Organism
Boleophthalmus pectinirostris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Boleophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2622593v1 (GCF_026225935.1) Unplaced Scaffold NW_026571018.1 (16660502..16677525)
100 previous assembly BP.fa (GCF_000788275.1) Unplaced Scaffold NW_018358116.1 (811150..827591, complement)

NW_026571018.1Genomic Context describing neighboring genes Neighboring gene H3 histone, family 3C Neighboring gene cone-rod homeobox Neighboring gene RNA-binding protein Nova-1-like Neighboring gene calpain, small subunit 1 a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026225935.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2622593v1 Primary Assembly

Genomic

  1. NW_026571018.1 Reference ASM2622593v1 Primary Assembly

    Range
    16660502..16677525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055148900.1 → XP_055004875.1  KICSTOR complex protein kaptin

  2. XM_020934598.2 → XP_020790257.1  KICSTOR complex protein kaptin

    Conserved Domains (1) summary
    pfam13517
    Location:312 → 376
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein
Heading Accession and Version

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